> ## Documentation Index
> Fetch the complete documentation index at: https://kalarislabs.com/llms.txt
> Use this file to discover all available pages before exploring further.

# dnanexus-integration — AI agent skill for lab automation

> Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow.

# `dnanexus-integration`

> Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Use for DNAnexus data transfers, dxapp.json development, execution monitoring, workflow import, and project automation.

**Category:** [lab-automation](/skills#lab-automation) · **License:** MIT · **Version:** 2.1

## Install

```bash theme={null}
npx research-agent-skills install dnanexus-integration
npx skills add KalarisLabs/research-agent-skills --skill dnanexus-integration
```

## When to use it

Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Use for DNAnexus data transfers, dxapp.json development, execution monitoring, workflow import, and project automation.

## Full playbook

Read [SKILL.md](https://github.com/KalarisLabs/research-agent-skills/blob/main/skills/dnanexus-integration/SKILL.md) for the complete workflow, references and any scripts. The agent installer copies the full skill folder.